PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00242.1.p
Common NameLOC105971727, MIMGU_mgv1a019981mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 222aa    MW: 24806.2 Da    PI: 6.6693
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00242.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.33.1e-28128189159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy WrKYGqK++ g+++pr+YYrCt++   gC+++k+v+ s+edp+++eitY+ +H+++
  Migut.F00242.1.p 128 LDDGYGWRKYGQKDILGAKYPRGYYRCTHRngqGCMATKQVQSSNEDPTIFEITYRRKHTCN 189
                       59***************************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-28118189IPR003657WRKY domain
PROSITE profilePS5081122.435123186IPR003657WRKY domain
SuperFamilySSF1182902.88E-25126190IPR003657WRKY domain
SMARTSM007748.7E-38128190IPR003657WRKY domain
PfamPF031066.2E-26129188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MENFGSDDLV KELSQGRELA NQLLIHFNYD RSSSSNETRD FLIQQILSSY DNALSALRHS  60
RYGGGAAPPP PPATSDSPLS LAGSPHRSDD SDDQDFNDQP SKKKKASSAI TWMQKVKVCT  120
ETGNEGQLDD GYGWRKYGQK DILGAKYPRG YYRCTHRNGQ GCMATKQVQS SNEDPTIFEI  180
TYRRKHTCNP RAYPTNTPSV PATMPDPQNE DPNPFTQNPQ QI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852050.11e-166PREDICTED: probable WRKY transcription factor 30
TrEMBLA0A022Q9161e-166A0A022Q916_ERYGU; Uncharacterized protein
STRINGGLYMA04G41701.11e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA117431922
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.12e-36WRKY DNA-binding protein 30